| Rank | Team | RPI | SOS | QWF | Selection Sum |
|---|---|---|---|---|---|
| 1 | St. Ignatius Prep, CA ( 17 - 1 ) | 1 | 1 | 6 | 8 |
| 2 | Coronado ( 22 - 2 ) | 1 | 7 | 1 | 9 |
| 3 | Torrey Pines ( 18 - 2 ) | 2 | 5 | 2 | 9 |
| 4 | Foothill, Santa Ana ( 14 - 3 ) | 2 | 7 | 2 | 11 |
| 5 | Foothill, Pleasanton ( 16 - 7 ) | 2 | 7 | 2 | 11 |
| 6 | Poway ( 14 - 8 ) | 6 | 3 | 4 | 13 |
| 7 | Los Alamitos ( 19 - 3 ) | 1 | 12 | 1 | 14 |
| 8 | Cathedral Catholic ( 12 - 9 ) | 7 | 1 | 8 | 16 |
| 9 | El Toro ( 11 - 8 ) | 6 | 5 | 7 | 18 |
| 10 | Holy Cross, MD ( 11 - 8 ) | 6 | 6 | 6 | 18 |
| 11 | Canyon Crest Academy ( 12 - 7 ) | 10 | 4 | 9 | 23 |
| 12 | Carondelet ( 21 - 2 ) | 1 | 22 | 1 | 24 |
| 13 | Scripps Ranch ( 13 - 4 ) | 5 | 15 | 5 | 25 |
| 14 | La Costa Canyon ( 15 - 6 ) | 4 | 17 | 6 | 27 |
| 15 | Westview, CA ( 9 - 10 ) | 13 | 2 | 16 | 31 |
| 16 | Carlsbad ( 10 - 5 ) | 9 | 13 | 10 | 32 |
| 17 | Rancho Bernardo ( 21 - 2 ) | 3 | 28 | 3 | 34 |
| 18 | Serra ( 12 - 6 ) | 12 | 10 | 15 | 37 |
| 19 | Otay Ranch ( 14 - 4 ) | 11 | 14 | 13 | 38 |
| 20 | La Jolla HS ( 12 - 7 ) | 8 | 24 | 7 | 39 |
| 21 | Santa Fe Christian ( 9 - 7 ) | 14 | 12 | 14 | 40 |
| 22 | Newport Harbor ( 6 - 9 ) | 11 | 8 | 21 | 40 |
| 23 | Beckman ( 15 - 3 ) | 4 | 33 | 6 | 43 |
| 24 | Amador Valley ( 11 - 10 ) | 10 | 27 | 10 | 47 |
| 25 | Bishop's School ( 9 - 5 ) | 15 | 22 | 12 | 49 |
| 26 | San Dieguito Academy ( 5 - 12 ) | 26 | 6 | 25 | 57 |
| 27 | Valley Center ( 7 - 11 ) | 17 | 23 | 18 | 58 |
| 28 | Mission Hills ( 8 - 10 ) | 19 | 19 | 21 | 59 |
| 29 | Mt. Carmel, CA ( 6 - 13 ) | 25 | 8 | 27 | 60 |
| 30 | Hilltop ( 13 - 4 ) | 16 | 30 | 17 | 63 |
| 31 | San Marcos ( 7 - 10 ) | 24 | 16 | 23 | 63 |
| 32 | Del Norte ( 5 - 13 ) | 28 | 9 | 29 | 66 |
| 33 | Patrick Henry, CA ( 7 - 9 ) | 27 | 18 | 22 | 67 |
| 34 | Preuss School ( 7 - 0 ) | 20 | 37 | 11 | 68 |
| 35 | Santana ( 10 - 9 ) | 18 | 31 | 19 | 68 |
| 36 | Bonita Vista ( 9 - 9 ) | 22 | 21 | 28 | 71 |
| 37 | Grossmont ( 9 - 7 ) | 21 | 32 | 20 | 73 |